Where Innovations Meets Personalized and Precision Medicine

Original article

 

 

Journal Metrics
of Volumes 10
Number of Issues 38
Number of Articles 186
Number of Contributors 365
Article View 71,526
PDF Download 59,646
View Per Article 384.55
PDF Download Per Article 320.68
 
Number of Submissions 72
Acceptance Rate 67
Time to Accept (Days) 40

Personalized and Precision Medicine Journal is an open-access access double-blind peer peer-reviewed publication which is published by AmitisGen TECH Dev Group, concerned with new concepts and findings in areas related to Personalized & Precision Medicine issues. PPMJ is a quarterly publication that welcomes original, review, novel, and high-impact articles in the journal's scope (See journal scope). PPMJ follows the Committee on Publication Ethics (COPE) and complies with the highest ethical standards in accordance with ethical laws. All submitted manuscripts are checked for similarity through a trustworthy software named iThenticate to be assured about its originality and then rigorously peer-reviewed by the reviewers.

  (Read more about this journal...)


        https://ecc.isc.ac/showJournal/39838


 

Association of FGFR2 Gene Polymorphisms (rs2981582 and rs1219648) with Breast Cancer Susceptibility in Iranian Women: A Case-Control Study with Haplotype and Expression Analysis

Pages 1-7

https://doi.org/10.22034/ppmj.2026.735666

Sahar Adl, Ahmad Hamta

Abstract Background: Breast cancer is the most common malignancy among women in Iran, characterized by a relatively early age of onset and a rising incidence rate. The single-nucleotide polymorphisms rs2981582 and rs1219648, located in intron 2 of the FGFR2 gene, have been linked to breast cancer susceptibility in genome-wide association studies (GWAS). Nevertheless, their significance in the Iranian population has not been extensively investigated.
This study investigates the association of FGFR2 polymorphisms (rs2981582 and rs1219648) with breast cancer risk in Iranian women, alongside haplotype interactions and gene expression profiling.
Methods: A case-control study was conducted with 160 participants (80 cases and 80 age-matched controls). FGFR2 SNPs were genotyped with PCR-RFLP. Chi-square tests were used to analyze associations of haplotypes. FGFR2 expression was evaluated in breast cancer subtypes using GEO (GDS2635, GDS3853) and Expression Atlas datasets. Statistical analyses were carried out using SPSS version 22.0 (IBM Corp., Armonk, NY, USA), with statistical significance defined as P<0.05. Hardy–Weinberg equilibrium (HWE) was verified for both SNPs in the control group (P>0.05).
Results: The TT genotype of rs2981582 was significantly associated with increased breast cancer risk (P=0.00; OR=3.566). No independent association was found for rs1219648 (P>0.05). Haplotypes AC and AT were significantly associated with elevated risk (P=0.004 and P=0.001, respectively). FGFR2 expression was upregulated in lobular carcinoma and downregulated in ductal carcinoma compared to healthy controls (P<0.05).
Conclusion: The rs2981582 TT genotype and specific haplotypes (AC, AT) are associated with increased breast cancer risk in Iranian women, supporting FGFR2 as a potential biomarker for early detection and personalized risk assessment in this population.

Pituitary hormones Profile, Cholesterol Levels, and Steroidogenic Genes Xxpression are Useful Information in Prostate Cancer

Pages 8-15

https://doi.org/10.22034/ppmj.2026.735667

Ghasem Ghorbani Vale Zaghard, Mehdi Haghi, Mehdi Ghiamirad, Saeid Ghorbian, Mehdi Ebrahimi

Abstract Objective: To investigate the relationship between changes in the level of Pituitary hormones, cholesterol levels, and the expression of genes involved in the biosynthesis of androgens, this study was designed.
Methods: In this study, the amount of changes in the levels of LH, FSH, and PRL hormones, as well as the level of cholesterol as a precursor of androgens, LDL and HDL lipoproteins, and the expression level of two genes, CYP17A1 and CYP11A1, in 120 people with prostate cancer as a case group and 120 people with BPH as a control group by RT-qPCR.
Results: The statistical analysis demonstrated that serum levels of testosterone, LH, and TSH were significantly higher in the malignant group compared to the benign group. PRL levels were also elevated in the Prostate cancer (PCa) group; however, this difference did not reach statistical significance. No significant difference was observed in serum PSA levels between the two groups. Prostate volume was significantly greater in the benign group than in the malignant group. Serum cholesterol levels were significantly higher in the PCa group compared to the Benign prostatic hyperplasia (BPH) group. In contrast, serum levels of LDL and HDL lipoproteins showed no significant differences between the groups. Additionally, the expression levels of CYP11A1 and CYP17A1 genes were significantly increased in the PCa group relative to the BPH group.
Conclusion: The results of this study showed that monitoring the hormonal profile and cholesterol level can play an important role in predicting the course of the disease.

Examining the Autoimmune Disorder Rheumatoid Arthritis and the Genetic Determinants Contributing to its Genesis

Pages 16-25

https://doi.org/10.22034/ppmj.2026.2066237.1066

Ramesh Ranjbar, Ramin Shukripour

Abstract Rheumatoid arthritis (RA) is an irreversible systemic autoimmune disorder. The advancement of the illness results in joint deformity and associated functional impairment, which profoundly impacts the standard of life of those affected. This review offers an overview of rheumatoid arthritis (RA), including a broad introduction to the illness, its epidemiology, associated risks, and pathogenesis. It also emphasizes advancements in fundamental research and the many mechanisms of signaling and molecular processes, including genetic variables. Summary of previous studies: In recent decades, researchers have garnered more interest in rheumatoid arthritis. Aberrant signaling pathways in rheumatoid arthritis (RA) constitute a significant area of study for identifying and treating the condition, offering crucial insights for comprehending this complex illness and formulating relevant therapies. The etiology of rheumatoid arthritis is associated with several signaling pathways. Research has repeatedly examined the etiology of rheumatoid arthritis (RA), revealing that both environmental and genetic variables play significant roles in its onset. Additionally, several research indicates that the susceptibility and severity of rheumatoid arthritis (RA) may correlate with the HLA-DRB1 variant, which exhibits the most significant genetic relationship with RA.

A Personalized Medicine Approach to Microbiome Analysis Aimed at Characterizing the Gut Microbiome

Pages 26-35

https://doi.org/10.22034/ppmj.2026.735670

Mohadeseh Sadeghinia, Meysam Tabatabaee

Abstract The human gut microbiome constitutes a highly diverse and unique ecosystem that plays a critical role in shaping host metabolism, immune function, and vulnerability to numerous diseases. Thanks to recent breakthroughs in high-throughput sequencing, shotgun metagenomics, and integrative multi-omics strategies, researchers can now achieve comprehensive profiling of microbial communities with strain-level precision and detailed functional insights. Specific microbial patterns have emerged as reliable predictive biomarkers for assessing disease risk, tracking progression, and determining treatment outcomes in various conditions, including metabolic syndrome, inflammatory bowel disease, autoimmune disorders, and cancer. By combining microbiome data with host genomics, metabolomics, and clinical metrics, precision medicine is enhanced, facilitating tailored interventions such as dietary changes, probiotics, prebiotics, and fecal microbiota transplantation. Sophisticated bioinformatics tools, alongside machine learning and artificial intelligence, streamline the analysis of complex, high-dimensional multi-omics data, helping to pinpoint crucial microbial taxa, functional pathways, and predictive markers. Nevertheless, significant hurdles persist regarding the standardization of sample collection, sequencing protocols, bioinformatic workflows, and reproducibility across different study cohorts. Additionally, ethical issues such as data privacy, informed consent, and fair access require careful attention. Future studies that integrate longitudinal multi-omics profiling, mechanistic investigations of host microbe interactions, and robust clinical validation of microbial biomarkers are expected to propel microbiome-driven personalized medicine forward. Ultimately, a thorough characterization of the gut microbiome offers a revolutionary approach to proactive, patient-centric healthcare, shifting focus from general population-based models to precise, individualized strategies for prevention, diagnosis, and therapy.

Investigation of Gene Expression and DNA Methylation of IGF2, PPARγ, LEP, and CDKN1C in Gestational Diabetes Mellitus

Pages 37-44

https://doi.org/10.22034/ppmj.2026.735672

Mahsa Maqsoodi, Abbas Ardalan

Abstract Gestational diabetes mellitus (GDM) is a prevalent complication of pregnancy associated with adverse outcomes for both mother and fetus. Epigenetic modifications, particularly DNA methylation, may play a significant role in its pathogenesis. This study aimed to evaluate the expression and methylation status of IGF2, PPARγ, LEP, and CDKN1C in women with GDM. In this case control study, 50 women with GDM and 50 healthy pregnant women were included. Gene expression levels and DNA methylation patterns were analyzed, and clinical risk factors were assessed. Significant differences were identified in both expression and methylation profiles of the studied genes between GDM patients and controls. Pre-pregnancy BMI, high-fat diet, and family history of diabetes were significantly associated with GDM. These results indicate that GDM is influenced by metabolic, environmental, and epigenetic factors, and that altered expression and methylation of IGF2, PPARγ, LEP, and CDKN1C may contribute to its development.

Pentagalloylglucose Suppresses Glioblastoma Progression via Wnt/β-Catenin Pathway Inhibition and EMT Reversal

Pages 45-51

https://doi.org/10.22034/ppmj.2026.735673

Seyedeh Saba Ebrahimi Hosseini

Abstract Background: Glioblastoma multiforme (GBM) is the most lethal primary brain tumor. GBM exhibits rapid growth and invasiveness along with a nadir prognosis. Epithelial–mesenchymal transition (EMT), combined with activated Wnt/β-catenin signaling, contributes to GBM progression and associated therapy resistance. Pentagalloylglucose (PGG), a polyphenolic compound from nature, has been shown to be anticancer in multiple cancers by inhibiting proliferation, migration, and EMT. The objectives are to demonstrate the effects of PGG on GBM cells and examine the modulation of EMT and the Wnt/β-catenin pathway.
Methods: U87-MG cells were treated with PGG (0.5–40 µM) for 24, 48, and 72 hours. Cell viability was assessed using the MTT assay. The expression levels of epithelial–mesenchymal transition (EMT) markers, including E-cadherin, N-cadherin, Vimentin, Snail, Slug, as well as β-catenin, were quantified by qRT-PCR. Cell migration was evaluated using a wound healing assay. Statistical analysis was performed using one-way ANOVA followed by Tukey’s post hoc test.
Results: PGG demonstrated a marked reduction in cell viability in a dose- and duration-dependent manner with IC₅₀ values at 18.4, 12.7, and 8.9 µM at 24, 48, and 72 hours, respectively. The upregulation of E-cadherin and downregulation of N-cadherin, Vimentin, and the Snail protein show that mesenchymal markers are being transcriptionally silenced. It was also a striking loss of β-catenin expression, which suggests Wnt/β-catenin suppression. Wound healing assay showed that PGG treatment resulted in a marked reduction of cell migration.
Conclusion: PGG significantly inhibits the progression of GBM by inhibiting EMT and downregulating the Wnt/β-catenin signaling pathways. Overall, PGG has potential as a natural, low-toxicity therapeutic or combinatory drug for glioblastoma, and future studies in vivo and in human trials will be needed to reaffirm this conclusion.

The Multifaceted Role of CD154 in SLE: Pathogenesis, Receptor Interactions, and Emerging Therapies

Articles in Press, Accepted Manuscript, Available Online from 01 May 2025

https://doi.org/10.22034/pmj.2025.2058206.1058

Farnaz Eghbalpour, Farnaz Eghbalpour

Abstract Systemic lupus erythematosus (SLE) is a multifaceted autoimmune disorder characterized by immune dysregulation and multi-organ involvement. Central to its pathogenesis is the CD154/CD40 signaling axis, which orchestrates key immunological processes, including T-B cell collaboration, dendritic cell activation, and cytokine production. Recent findings have expanded the scope of CD154 beyond its classical receptor CD40, identifying integrins as alternative receptors, thus broadening its biological impact. These discoveries underline the complexity of CD154's role in SLE and its potential as a therapeutic target. First-generation CD154/CD40-targeted therapies showed promise but were hindered by thromboembolic complications. However, second-generation therapeutics, including monoclonal antibodies, small molecules, and gene-editing technologies, exhibit improved safety and efficacy profiles. This review delves into the molecular and cellular mechanisms of CD154 in SLE, explores its emerging roles through integrin interactions, and evaluates the therapeutic advancements targeting this axis. The findings highlight CD154 as a central mediator in SLE pathogenesis and a compelling target for innovative treatment strategies.

An Ethnographic Review of Medicinal Plants Used for Alleviating Menstrual Pain in the Western Border Ethnobotany of Iran

Articles in Press, Accepted Manuscript, Available Online from 01 May 2025

https://doi.org/10.22034/pmj.2025.2059289.1061

Alireza Soleimani Mamalo, Shabnam Vazifekhah

Abstract Introduction: In this context, the use of medicinal plants as a natural and effective remedy for relieving Menstrual pain has been acknowledged in the western border region of Iran, serving as an alternative or complementary therapeutic approach. The aim of this study is to identify the medicinal plants employed in this region of Iran for the treatment of menstrual pain.
Methodology: This review study employed keywords such as medicinal plants, Iran, menstrual pain, and the provinces of West Azerbaijan, East Azerbaijan, Ardabil, Kurdistan, Kermanshah, Ilam, Khuzestan, and their cities, along with ethnobotany terms. Databases such as Google Scholar, SID, MegaIran, PubMed, and Scopus were utilized for article searches. Ethnobotanical articles related to the topic were selected for text review.
Results: Based on the ethnobotanical review, it was identified that in the cities and provinces of the western border region of Iran, medicinal plants such as fennel, wild parsley, shepherd's purse, black cumin, thyme, dandelion, rue, safflower, myrtle, European hornbeam, Kurdistan pistachio, mint, marshmallow root, male orchid, yarrow, agrimony, nettle, bitter herb, verbena, horsetail, periwinkle, marigold, saffron, wild thyme, savory, rhubarb, and eastern chamomile are commonly used for managing, controlling, and treating menstrual pain. Notably, the highest diversity of plant species was observed in the regions of Behbahan, Khuzestan, and Zrewar, Kurdistan. Leaves were the most commonly used plant part, and the Asteraceae and Lamiaceae families presented the highest number of species, indicating the rich diversity of medicinal and traditional plant applications.
Conclusion: The findings of this study demonstrate that the local communities in the western border region of Iran possess extensive knowledge regarding the use of medicinal plants for alleviating menstrual pain. Documenting and scientifically exploring this knowledge could lay the groundwork for the development of effective and natural herbal medicines in the domain of women’s health.

The Use of Bacteriophages in Cancer Therapy

Articles in Press, Accepted Manuscript, Available Online from 28 October 2024

https://doi.org/10.22034/pmj.2024.2044427.1042

Sanaz Khosravi

Abstract Cancer is a catastrophic illness with a significant worldwide fatality rate, anticipated to rise in the next years. Contemporary treatment modalities, including chemotherapy and radiation therapy, include constraints such as adverse effects, inconsistent efficacy, elevated expenses, and restricted accessibility. Bacteriophages have arisen as multifaceted instruments in bioengineering, with significant promise in tissue engineering, vaccine formulation, and immunotherapy. Bacteriophages are being used extensively in several fields of biotechnology and medicine, with cancer treatment being the most compelling application. Numerous studies are increasingly validating the effectiveness and safety of phage-based vectors as systemic delivery vehicles for therapeutic genes and medicines in cancer treatment. Moreover, the genetic composition of phages may be used for the creation of innovative DNA vaccines and antigen display systems, since they provide a highly structured and repeated presentation of antigens to immune cells. Bacteriophages have created novel opportunities for the precise targeting of certain molecular determinants in cancer cells. Phages may serve as anticancer agents and as carriers for imaging compounds and medicines. This article introduces bacteriophage and examines the performance of bacteriophages and bacteriophage engineering in targeted cancer treatment.

The Role of Hormonal Therapy in the Management of Hormone Receptor-Positive Breast Cancer: Current Trends and Future Directions

Articles in Press, Accepted Manuscript, Available Online from 16 May 2026

https://doi.org/10.22034/pmj.2025.2050921.1052

Sahar Abareshi

Abstract Breast cancer is responsible for more than 2.3 million newly diagnosed cases each year, according to the statistics. A hormonal imbalance, which is defined by unregulated activity of estrogen and progesterone, is often the cause of this type of cancer. It has become easier to handle patients who have HR+ breast cancer, particularly in women who have both advanced and early-stage disease, as a result of the deployment of estrogen-blocking hormone treatment. The permissiveness of tamoxifen, which was the first selective estrogen receptor modulator (SERM) to be commercialized, made it possible for more hormonal therapies to be developed. The cornerstone of breast cancer treatment is comprised of aromatase inhibitors (AIs), selective estrogen receptor degraders (SERDs), and cyclin-dependent kinase inhibitors (CDK) 4/6. These three types of drugs ultimately lead to improved patient outcomes. On the other hand, the inherent or acquired resistance of cancers to hormone therapy continues to be a serious cause for concern. Alterations in the genetic makeup of the tumor, as well as the activation of alternate pathways, make this situation even worse. The increasing development of molecular biology, precision medicine, and targeted therapies, on the other hand, is pointing to a new strategy for dealing with these problems. The purpose of this study is to investigate prospective treatment options and to shed light on the significant role that hormone therapy plays in the management of HR-positive breast cancer.

Comparison of Hemodynamic Changes and Post-Anesthesia Pain Intensity in Premenopausal and Postmenopausal Women Undergoing Elective Abdominal Hysterectomy with General Anesthesia

Articles in Press, Accepted Manuscript, Available Online from 16 May 2026

https://doi.org/10.22034/ppmj.2026.2073252.1068

Hananeh Habib

Abstract Background: Menopause comes along with a set of hormonal and physiological changes that can change cardiovascular responses during surgeries, along with altering pain perception. This research intends to analyze pain intensity during and after anesthesia and changes in hemodynamics in pre- and post-menopausal women during elective abdominal hysterectomy under general anesthesia.
Methods: Elective surgery patients, in this case, were 88 in number, with each division having 44 patients (before menopause and after). Women in each group were defined as premenopausal (n=44) and postmenopausal (n=44) in equal proportion. Other metrics looked at were Systolic Blood Pressure (SBP) and Diastolic Blood Pressure (DBP), also known as SpO₂. Patients’ heart rate and SpO₂ were checked during the surgery and after the surgery as well. Pain was assessed with the use of standardized scale methods, and participants were questioned on the pain felt during the post-operative period.
Results: While the premenopause cohort showed lower fluctuations in sensitivity to changes in SBP, DBP, and HR during and after anesthesia, the Postmenopause cohort exhibited the opposite (p<0.05). In each group, the SpO₂ levels were maintained within normal limits and showed no significant group differences. In the postoperative period, the pain score was significantly higher in the postmenopausal group with lower pain tolerance and a higher requirement for analgesic treatment. Spoken demographics such as age, body mass index (BMI), and other associated conditions showed a moderating influence on the hemodynamic response and pain outcomes.
Conclusion: Following menopause, diminished vascular adaptability, along with increased sympathetic tone and decreased central pain modulatory control due to lack of estrogen, might explain the instability of hemodynamics and increased postoperative pain. These observations could help in the formulation of appropriate anaesthetic techniques and postoperative pain relief policies in relation to the reproductive status of women.

Polycystic ovary syndrome and genetic factors influencing its development: A review article

Polycystic ovary syndrome and genetic factors influencing its development: A review article

Volume 6, Issue 23, Autumn 2021, Pages 25-29

https://doi.org/10.22034/pmj.2021.249631

Tohid Piri-Gharaghie

Abstract Polycystic ovary syndrome (PCOS) is a common infertility disorder, affecting a significant proportion of the global population. This syndrome has been one of the most controversial entities in gynecological endocrinology for many years. Both genes and the environment contribute to PCOS. Obesity, exacerbated by poor dietary choices, and physical inactivity, worsens PCOS in susceptible individuals. PCOS is a complex and heterogeneous disorder characterized by hyperandrogenemia, hyperinsulinemia, insulin resistance, and chronic anovulation. Many candidate genes have been identified to be one of the causes of PCOS. Different studies have been carried out to find the genetic correlation of PCOS. It is essential to carry out such studies that identify the clear cause of PCOS and its genetic association and hormonal disbalance. Currently, PCOS is considered a polygenic trait that might result from the interaction of susceptible and protective genomic variants and environmental factors, during either prenatal or postnatal life.

Exploring the Attitudes, Beliefs and Perceptions of Undergraduate and Graduate Students in Bangladesh towards Precision Medicine and Pharmacogenomics Practice: A Qualitative Study

Exploring the Attitudes, Beliefs and Perceptions of Undergraduate and Graduate Students in Bangladesh towards Precision Medicine and Pharmacogenomics Practice: A Qualitative Study

Volume 8, Issue 29, Spring 2023, Pages 14-24

https://doi.org/10.22034/pmj.2023.705459

Nashrifa Israt Khanom, Saima Nur, Sheikh Sabrina Mustari, Omme Jamila, Abu Sa A Dat, Md Mehade Hasan, Mushfiquzzaman Mahim, Farhana Faiza Bristy, Nasrin Tamanna, Md.Moshrraf Hossen, Swapan Kumar Das, Tanvir Ahmed, Md. Ashrafuzzaman Sapon, Md. Shafiqul Islam, Md. Monirul Islam

Abstract The aim of this study is to investigate the attitude, beliefs, and perceptions among undergraduate and graduate students toward precession medicine (PM) and pharmacogenomics (PGx) practice. A cross-sectional survey is conducted amongst students from different universities in Bangladesh.The results of the survey showed that the majority of students had a positive attitude towards precision medicine and pharmacogenomics, perceiving it as a means to improve diagnosis and treatment accuracy. Furthermore, many students also expressed a willingness to learn more about precision medicine and pharmacogenomics, suggesting that there is potential for these practices to be utilized in Bangladesh. Particularly in this study, 337 students from life science and relevant programs participated. From this study, it is shown that 84% of graduate students and 74% of undergraduate students thought PM is a promising healthcare model. In addition, 39% of students are highly encouraged to pursue their post-graduation in the subject areas of PGx and PM to support patients. The majority (62%) thought that patient privacy was the ethical concern most closely related to pharmacogenomic testing, while 19% of respondents thought that data confidentiality was the key issue. The results provide insight into the potential of precision medicine and pharmacogenomics in Bangladesh and suggest that further research into the attitudes of healthcare professionals should be conducted in order to take full advantage of the potential of these practices.

Microplastic Neurotoxicity: Pathways, Mechanisms, and Implications for Neurodegenerative Disease

Microplastic Neurotoxicity: Pathways, Mechanisms, and Implications for Neurodegenerative Disease

Volume 10, Issue 37, Spring 2025, Pages 31-38

https://doi.org/10.22034/pmj.2025.2058727.1060

Shabnam Radbakhsh, Rezvan Norouzzadeh

Abstract This review synthesizes and elaborates on current studies examining the neurotoxic effects of microplastics, emphasizing their mechanisms of entry into the central nervous system and their possible involvement in the development of neurodegenerative disorders. The pervasive presence of microplastics in the environment has heightened concerns about their accumulation in biological systems, particularly their capacity to traverse biological boundaries and engage with neuronal tissues. This article seeks to synthesize and critically evaluate the existing scientific literature on microplastic neuroinvasion, concentrating on the mechanisms through which these particles penetrate the blood-brain barrier (BBB) specifically via transcellular, paracellular, or Trojan horse pathways—and their ensuing effects on neuronal homeostasis.

We investigate the physiological and molecular reactions triggered by microplastics, encompassing oxidative stress induction, mitochondrial failure, neuroinflammation, and synaptic disruption. These pathogenic processes may facilitate the onset and advancement of several neurodegenerative disorders, including Alzheimer’s disease, by intensifying amyloid-beta aggregation, tau phosphorylation, and neuroimmune activation. Additionally, we examine the burgeoning epidemiological and experimental evidence associating microplastic exposure with cognitive deterioration and neuronal impairment.

This review offers a thorough analysis of microplastic neurotoxicity by evaluating both in vitro and in vivo studies, with the objective of elucidating the potential neurological hazards associated with these environmental contaminants. We emphasize significant deficiencies in existing research and propose future avenues, encompassing enhanced detection techniques, public health initiatives, and efforts to reduce human exposure to microplastics.

Comparison of different methods of DNA extraction from paraffin-embedded tissues

Comparison of different methods of DNA extraction from paraffin-embedded tissues

Volume 5, Issue 17, Spring 2020, Pages 5-8

https://doi.org/10.22034/pmj.2020.43452

Ramadhan Ibrahim, Saeed Megdadi, Sareh Bakhshandeh bavarsad, Najme Shojaei

Abstract The most common human archival specimens are formalin-fixed and paraffin-embedded tissues. PCR-based techniques have been coupled with new developments in the extraction of DNA from FFPE. Herein, we report the results of a comparison of different methods of DNA extraction from FFPE specimens, including phenol-chloroform, salting-out, and silica-based commercial kits. Results showed no significant differences between the amounts of DNA obtained from each of the extraction methods studied; however, the salting-out DNA extraction method described is much easier and less toxic than the phenol–chloroform method.

Increased expression of the lnc H19 gene in the plasma of people with breast cancer

Increased expression of the lnc H19 gene in the plasma of people with breast cancer

Volume 5, Issue 17, Spring 2020, Pages 12-14

https://doi.org/10.22034/pmj.2020.43454

kazhaleh Mohammadi, Sadegh Shojaei Baghini, Mohammad Ali Saremi

Abstract The majority of ncRNAs are known as long non-coding RNAs (lncRNAs) whose length exceeds 200 nucleotides. H19, a lncRNA, is the transcription product of the H19 gene, an oncogene in breast cancer, and is highly expressed in cancer tissues compared with normal tissues. The expression level of H19 is associated with the oncogenesis, proliferation, invasion, metastasis, and drug resistance of breast cancer. H19 expression levels were detected in breast cancer plasma using qRT-Real-Time PCR assay in 50 breast cancer samples and 50 healthy control samples. The results showed that the expression of this gene in both the tissue and the plasma of patients increased compared to that of healthy individuals.

Analysis of EGFR gene mutations in tissue samples of lung cancer tumors

Analysis of EGFR gene mutations in tissue samples of lung cancer tumors

Volume 5, Issue 17, Spring 2020, Pages 1-4

https://doi.org/10.22034/pmj.2020.43451

Blnd Ibrahim Mohammed, Amir Mohammadi, Nafise Poorhasan

Abstract Lung cancer is the leading cause of cancer deaths worldwide. Approximately 25% of nonsmall-cell lung cancers have mutations in the EGFR gene, most of which occur in hotspot regions in exons 18, 19, 20, and 21. In-frame deletions in exon 19 (~50%) and the L858R point mutation in exon 21 (~40%) are associated with a favorable response to EGFR tyrosine kinase inhibitors. In this study, mutations of two exons of 19 and 21 in 50 lung cancer tumor samples were investigated by the sequence method. From 50 lung cancer patients, 8 (16%) patients had an L858R (c.2573T>G) mutation, 6 (12%) patients had deletion type 1a mutation, and one patient had deletion type 1b mutation. Examining the sequence of candidate genes associated with lung cancer can be very important in choosing the right treatment approach.

Relationship Between FGFR4 Gene rs351855 G/A Polymorphism and the Risk of Lung Cancer in the Northern Provinces

Relationship Between FGFR4 Gene rs351855 G/A Polymorphism and the Risk of Lung Cancer in the Northern Provinces

Volume 6, Issue 22, Summer 2021, Pages 6-9

https://doi.org/10.22034/pmj.2021.246863

Ghadir A Jamal, Hussam Saadi Aziz

Abstract Lung cancer is the leading cause of cancer death in men and the second leading cause of cancer death in women worldwide. FGFR is involved in a variety of cellular processes including angiogenesis, wound healing, tissue repair, and tumorigenesis. Recently, a common polymorphism in the transmembrane domain of the FGFR4 gene, Gly388Arg, has been reported to correlate with alteration of cell migration in vitro and with disease progression and/or survival in breast, colon, prostate and lung cancer. To evaluate the prognostic significance of the FGFR4 Gly388Arg polymorphism in lung cancer, we analyzed a case-control study of 110 lung cancer patients and 90 healthy control. Genomic DNA from whole-blood specimens was extracted using Salting-out method. Quality of DNA was evaluated by electrophoresis. To determine the distribution of FGFR4 Arg388 and FGFR4 Gly388 alleles in lung carcinoma patients, RFLP-PCR was used. In this study demonstrated that there was no relationship between polymorphism of FGFR4 Gly388Arg gene and lung cancer. Also, no significant relationship was observed between this polymorphism and clinical and pathological features of patients. It is suggested that the large casecontrol studies are needed to detect genetic determinants affecting patients’ prognosis, with the promise of targeting these putative genetic determinants to provide new therapeutic tools for patients with lung cancer.

The Multifaceted Role of CD154 in SLE: Pathogenesis, Receptor Interactions, and Emerging Therapies

The Multifaceted Role of CD154 in SLE: Pathogenesis, Receptor Interactions, and Emerging Therapies

Articles in Press, Accepted Manuscript, Available Online from 01 May 2025

https://doi.org/10.22034/pmj.2025.2058206.1058

Farnaz Eghbalpour, Farnaz Eghbalpour

Abstract Systemic lupus erythematosus (SLE) is a multifaceted autoimmune disorder characterized by immune dysregulation and multi-organ involvement. Central to its pathogenesis is the CD154/CD40 signaling axis, which orchestrates key immunological processes, including T-B cell collaboration, dendritic cell activation, and cytokine production. Recent findings have expanded the scope of CD154 beyond its classical receptor CD40, identifying integrins as alternative receptors, thus broadening its biological impact. These discoveries underline the complexity of CD154's role in SLE and its potential as a therapeutic target. First-generation CD154/CD40-targeted therapies showed promise but were hindered by thromboembolic complications. However, second-generation therapeutics, including monoclonal antibodies, small molecules, and gene-editing technologies, exhibit improved safety and efficacy profiles. This review delves into the molecular and cellular mechanisms of CD154 in SLE, explores its emerging roles through integrin interactions, and evaluates the therapeutic advancements targeting this axis. The findings highlight CD154 as a central mediator in SLE pathogenesis and a compelling target for innovative treatment strategies.

Publication Information
Indexing and Abstracting

Keywords Cloud